Package index • rphylopic

Getting silhouettes

Functions for identifying and retrieving PhyloPic silhouettes.

get_uuid(): Get a PhyloPic uuid

resolve_phylopic(): Use a taxonomic name from another database to get a PhyloPic image UUID

pick_phylopic(): Pick a PhyloPic image from available options

get_phylopic() print(<Picture>) print(<phylopic>): Retrieve an image for a given PhyloPic uuid

plot(<Picture>) plot(<phylopic>): Preview a PhyloPic silhouette

get_attribution(): Get PhyloPic attribution data

browse_phylopic(): Browse PhyloPic for a given taxonomic name or uuid

save_phylopic(): Save a PhyloPic image

Adding silhouettes to plots

Functions for adding silhouettes to various plots.

geom_phylopic(): Geom for adding PhyloPic silhouettes to a plot

phylopic_key_glyph(): Use PhyloPics as legend key glyphs

scale_height_continuous() scale_width_continuous(): Scales for phylopic height or width

add_phylopic(): Annotate a ggplot plot with PhyloPics

add_phylopic_base(): Add PhyloPics to a base R plot

add_phylopic_legend(): Add a PhyloPic legend for a base R plot

add_phylopic_tree(): Add PhyloPics to a phylogenetic tree plotted with base R

Modifying silhouettes

Functions to modify silhouettes in various ways.

flip_phylopic(): Flip a PhyloPic silhouette along its horizontal and/or vertical axis

rotate_phylopic(): Rotate a PhyloPic silhouette

recolor_phylopic(): Recolor a PhyloPic image